Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs114176245 chr11:102719534 C/T 8.45E-6 280 25.63 26.52 10.97 KM Plot
KIRP rs11425382 chr3:124498095 C/CA 3.86E-5 286 26.1 25.65 16.47 KM Plot
KIRP rs114327856 chr6:26249615 C/T 3.35E-6 287 25.7 26.63 17.13 KM Plot
KIRP rs11451447 chr15:26155665 C/CA 9.66E-5 282 22.28 20.8 26.2 KM Plot
KIRP rs114637539 chr12:49779610 G/T 4.54E-6 287 25.67 26.48 10.97 KM Plot
KIRP rs11487867 chr1:209892070 G/T 4.61E-5 288 25.6 26.2 16.83 KM Plot
KIRP rs11492864 chr10:88252053 C/T 5.8E-8 285 26.38 23.1 9.77 KM Plot
KIRP rs11492865 chr10:88252310 T/C 2.03E-8 287 26.38 22.1 9.77 KM Plot
KIRP rs11547133 chr17:78355918 G/A 2.21E-8 282 24.48 37 9.77 KM Plot
KIRP rs11550062 chr17:80710097 G/T 6.29E-9 283 25.62 30.92 16.4 KM Plot
KIRP rs11578293 chr1:205070178 T/C 7.28E-5 288 23.02 28.03 21.9 KM Plot
KIRP rs11592058 chr10:124808484 G/A 0.000119 287 25.4 28.17 18.33 KM Plot
KIRP rs11592600 chr10:88223895 T/C 5.8E-8 285 26.38 23.1 9.77 KM Plot
KIRP rs11593582 chr10:124801455 A/G 0.000125 286 25.4 27.37 18.33 KM Plot
KIRP rs11593841 chr10:124806000 T/C 0.000119 287 25.57 27.37 18.33 KM Plot